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Item Open Access Transitions in solvate crystals of a tetraaryladamantane(2023) Frey, Wolfgang; Schwenger, Alexander; Berking, Tim; Richert, ClemensObtaining high-resolution structures of liquid compounds can be difficult. Encapsulating them in the lattice of a larger organic molecule acting as crystallization chaperone is one option to overcome this difficulty. Tetraaryladamantane ethers can play the role of chaperones, accommodating a range of different guest molecules in their crystals. How well-ordered crystalline arrangements for molecules of different shape are achieved is not clear. Cases in which more than one structure is found may shed light on this phenomenon. Here, we report low-order cubic crystal structures of 1,3,5,7-tetrakis(2,4-dimethoxyphenyl)adamantane (TDA) encapsulating ortho-xylene or cyclohexane, together with better ordered structures obtained after warming the crystals to 60 °C. Evidence for cubic crystal systems was also found for limonene, hexachlorobutadiene and eucalyptol, with a transition to a triclinic system for the former two, but no transition up to 70 °C for the latter. These findings indicate that some solvate structures of TDA can readily undergo structural transitions to less solvated, better ordered systems. Crystals obtained by rapid thermal crystallization may be in kinetically trapped states, and the transition to a solvate-free crystal system appears to have a kinetic barrier that depends strongly on the structure of the liquid guest molecules encapsulated in the lattice.Item Open Access Autonomous adaption of intelligent humidity‐programmed hydrogel patches for tunable stiffness and drug release(2023) Pflumm, Stephan; Wiedemann, Yvonne; Fauser, Dominik; Safaraliyev, Javidan; Lunter, Dominique; Steeb, Holger; Ludwigs, SabineIntelligent humidity‐programmed hydrogel patches with high stretchability and tunable water‐uptake and ‐release are prepared by copolymerization and crosslinking of N‐isopropylacrylamide and oligo(ethylene glycol) comonomers. These intelligent elastomeric patches strongly respond to different humidities and temperatures in terms of mechanical properties which makes them applicable for soft robotics and smart skin applications where autonomous adaption to environmental conditions is a key requirement. It is shown that beyond using the hydrogel in the conventional state in aqueous media, new patches can be controlled by relative humidity. This humidity programming of the patches allows to tune drug release kinetics, opening potential application fields such as skin wound therapy and personalized medication. In situ dynamic‐mechanical measurements show a huge dependence on temperature and humidity. The glass transition temperature Tg shifts from around 60 °C at dry conditions to below 0 °C for 75% r.h. and higher. The storage modulus is tunable over more than four orders of magnitude from 0.6 up to 400 MPa. Time‐temperature superposition in master curves allows to extract relaxation times over 14 orders of magnitude. With strains at break of over 200% the patches are compliant with human skin and therefore patient‐friendly in terms of adapting to movements.Item Open Access Refined read‐out : the hUHRF1 Tandem‐Tudor domain prefers binding to histone H3 tails containing K4me1 in the context of H3K9me2/3(2023) Choudalakis, Michel; Kungulovski, Goran; Mauser, Rebekka; Bashtrykov, Pavel; Jeltsch, AlbertUHRF1 is an essential chromatin protein required for DNA methylation maintenance, mammalian development, and gene regulation. We investigated the Tandem-Tudor domain (TTD) of human UHRF1 that is known to bind H3K9me2/3 histones and is a major driver of UHRF1 localization in cells. We verified binding to H3K9me2/3 but unexpectedly discovered stronger binding to H3 peptides and mononucleosomes containing K9me2/3 with additional K4me1. We investigated the combined binding of TTD to H3K4me1-K9me2/3 versus H3K9me2/3 alone, engineered mutants with specific and differential changes of binding, and discovered a novel read-out mechanism for H3K4me1 in an H3K9me2/3 context that is based on the interaction of R207 with the H3K4me1 methyl group and on counting the H-bond capacity of H3K4. Individual TTD mutants showed up to a 10,000-fold preference for the double-modified peptides, suggesting that after a conformational change, WT TTD could exhibit similar effects. The frequent appearance of H3K4me1-K9me2 regions in human chromatin demonstrated in our TTD chromatin pull-down and ChIP-western blot data suggests that it has specific biological roles. Chromatin pull-down of TTD from HepG2 cells and full-length murine UHRF1 ChIP-seq data correlate with H3K4me1 profiles indicating that the H3K4me1-K9me2/3 interaction of TTD influences chromatin binding of full-length UHRF1. We demonstrate the H3K4me1-K9me2/3 specific binding of UHRF1-TTD to enhancers and promoters of cell-type-specific genes at the flanks of cell-type-specific transcription factor binding sites, and provided evidence supporting an H3K4me1-K9me2/3 dependent and TTD mediated downregulation of these genes by UHRF1. All these findings illustrate the important physiological function of UHRF1-TTD binding to H3K4me1-K9me2/3 double marks in a cellular context.Item Open Access Control of molecular packing in crystal and electron communication of two ferrocenyl moieties across chiral isomannide or isosorbide bridge(2023) Zullo, Valerio; Guo, Tianao; Iuliano, Anna; Ringenberg, Mark R.Intramolecular electronic communication between electrochemically active groups connected by a bridging moiety can be modified through small changes in the spatial disposition of the redox active moieties and/or by the nature of the central core. In this study, chiral bio-based compounds, namely isomannide and isosorbide, were employed as cheap and easy-to-functionalize chiral scaffolds to bridge two ferrocenyl electroactive moieties. The crystal structures of both bis-ferrocenyl diester complexes were studied and they showed that the chirality of the bridge results in an open or tight helical crystal packing. The electron communication between the two electroactive units in the mixed valent monocations was also investigated using electrochemistry (cyclic voltammetry and differential pulsed voltammetry), and spectroelectrochemistry in the UV-Vis NIR. A computational study through time-dependent DFT was also employed to gain greater insight into the results obtained.Item Open Access The effect of mPEGA/EHA ratio and copolymer composition on the solution behavior of amphiphilic, comb‐shape copolymers synthesized via Cu(0)‐mediated SET‐LRP for potential drug delivery applications(2023) Pourdakheli Hamedani, Yasaman; Çakırefe, Semanur; Fietz, Agnes; Hurst, José; Schnichels, Sven; Adams, FriederikeComb-shape, block copolymers from hydrophilic poly(ethylenglycol) monomethyl ether acrylate (mPEGA, A) and hydrophobic 2-ethylhexyl acrylate (EHA, B) are synthesized by copper(0)-mediated single-electron transfer living radical polymerization (SET-LRP) via sequential addition of the two monomers, resulting in different compositions (AB, ABA, BAB, BA), molar masses, and mPEGA/EHA ratios. All polymers show narrow molar mass distributions and molecular weights of 7.7-25.50 kg mol-1, demonstrating precise control over the polymerization and molecular weights through the utilization of SET-LRP. Kinetic experiments are conducted to investigate the polymerization behavior of mPEGA and EHA in N,N-dimethylformamide as a rather uncommon solvent for SET-LRP further underlining a living-type polymerization. Amphiphilic properties are investigated by critical micelle concentration (CMC) measurements and formation of micelles in water. A reverse relation between mPEGA/EHA ratio and CMC values reveals that an increased hydrophobicity leads to decreased CMC values. The self-assembly behavior of polymers in water confirms the formation of uniform and stable micelles in water with a size between 12 and 184 nm depending on the composition of the polymers. With increased hydrophilicity, micelle sizes increase as well. In vitro tests of the obtained polymers show excellent biocompatibility even at high concentrations further affirming their suitability for drug delivery applications.Item Open Access Spectroscopic characterization of diazophosphane - a candidate for astrophysical observations(2023) Tschöpe, Martin; Rauhut, GuntramQuite recently, diazophosphane, HP-N≡N, was synthesized for the first time. This was accomplished by a reaction of PH3 with N2 under UV irradiation at 193 nm. As these two molecules have been observed in different astrophysical environments, as for example, in the circumstellar medium and, in particular, in the AGB star envelope IRC+10216, the question arises whether HPN2 can be found as well. So far there is only the aforementioned experimental work, but neither rotational nor rovibrational data are available. Hence, the lack of accurate line lists, etc. to identify diazophosphane is the subject of this work, including a detailed analysis of the rotational, vibrational, and rovibrational properties for this molecule. Our calculations rely on multidimensional potential energy surfaces obtained from explicitly correlated coupled-cluster theory. The (ro)vibrational calculations are based on related configuration interaction theories avoiding the need for any model Hamiltonians. The rotational spectrum is studied between T = 10 and 300 K. In contrast, the partition functions for HPN2 and DPN2 are given and compared for temperatures up to 800 K. In addition, more than 70 vibrational transitions are calculated and analyzed with respect to resonances. All these vibrational states are considered within the subsequent rovibrational calculations. This allows for a detailed investigation of the infrared spectrum up to 2700 cm-1 including rovibrational couplings and hot bands. The results of this study serve as a reference and allow, for the first time, for the identification of diazophosphane, for example, in one of the astrophysical environments mentioned above.Item Open Access Extension of a VCI program for the calculation of rovibrational intensities(2023) Tschöpe, Martin; Rauhut, Guntram (apl. Prof. Dr.)Die Identifizierung von Molekülen im interstellaren Medium, in zirkumstellaren Scheiben und in den Atmosphären kalter Exoplaneten ist eine große Herausforderung in der Astrophysik und basiert hauptsächlich auf hochgenauen Rotations- und Rotationsschwingungs-Referenzspektren. Eine Möglichkeit, diese Referenzspektren zu bestimmen, sind ab initio-Berechnungen, da sie eine effiziente Simulation eines breiten Bereichs von Bedingungen (einschließlich extrem niedriger Drücke und Temperaturen) ermöglichen. In dieser Arbeit wurde eine neue und besonders effiziente Implementierung der Rotationsschwingungskonfigurationswechselwirkungstheorie für die Berechnung von Infrarot-Rotationschwingungsspektren entwickelt, um die Berechnung dieser Referenzspektren zu ermöglichen. Der Ansatz basiert auf Normalkoordinaten und einer Mehrmodenentwicklung der mehrdimensionalen Potential- und Dipolmomentflächen sowie Schwingungs-Selbst-konsistentes-Feld-Verfahren und Schwingungskonfigurationswechselwirkungstheorie. Dabei wird ein direktes Produkt zwischen Schwingungsbasisfunktionen und Rotationsbasisfunktionen verwendet. So kann im Gegensatz zu der zuvor eingeführten Rotationskonfigurationswechselwirkungstheorie die Wechselwirkung zwischen Rotations- und Vibrationsbanden berücksichtigt werden. Dies geschieht mit hoher Genauigkeit, indem die Terme höherer Ordnung des inversen effektiven Trägheitsmomenttensors μ für den Rotationsterm und die Coriolis-Kopplung im Watson Hamiltonian berücksichtigt werden. Darüber hinaus werden eine neue Rotationsbasis namens Molekülspezifische Rotationsbasis (MSRB) und eine neue Art der Zuweisung von Rotationsschwingungsquantenzahlen eingeführt. Das Konvergenzverhalten verschiedener Entwicklungen für die Rotationsschwingungskonfigurationswechselwirkungstheorie (RVCI) zeigte sehr individuelle Effekte für die fünf untersuchten Parameter. Wenn die maximale Gesamtdrehimpulsquantenzahl Jmax oder die Größe der Schwingungsbasis nicht ausreichend konvergiert, treten besonders große Artefakte auf. Es werden effiziente Methoden zur Erkennung und Vermeidung dieser Probleme vorgestellt. Auch die Größe des Schwingungsbasissatzes ist ein entscheidender Parameter für die Konvergenz des Spektrums. Der beste Indikator für die Konvergenz bezüglich dieses Parameters und für die Stärke der Kopplung ist der spektrale Abstand zwischen den Schwingungsbanden. Für die beiden quasi-entarteten Schwingungsmoden von H2 CS ist die Coriolis-Kopplung nullter Ordnung sehr entscheidend, während die Terme erster Ordnung nur geringe Änderungen verursachen. Im Vergleich zu den Coriolis-Kopplungstermen erfordern die Rotationsterme eine um eine Ordnung höhere μ-Tensorentwicklung für die gleiche Genauigkeit. Die erste Ordnung führt für ganze Progressionen zu Energieverschiebungen von höchstens 5 cm-1 . Die durch die Terme der zweiten Ordnung hervorgerufenen Änderungen sind um mehr als eine Größenordnung geringer. Da das Fehlen von Kopplungstermen höherer Ordnung keine Artefakte im Spektrum verursacht, ist eine unzureichende Konvergenz in den resultierenden Spektren sehr schwierig zu erkennen. Die Berechnungen für die erste Veröffentlichung in dieser Dissertation beruhten auf einer Reihe von Näherungen, die im weiteren Verlauf dieser Arbeit entfernt werden konnten. Die meisten dieser Näherungen hatten kaum Auswirkungen auf die Spektren von Ketenimin, da sie bis 2900 cm-1 nur zu geringfügigen Änderungen des Spektrums führten. Oberhalb dieser Grenze zeigen jedoch die ν1 -Bande und die Kopplung zwischen ν8 + ν12 und ν11 , dass sich die Qualität der Quantenzahlzuordnung und die Konsistenz der Intensitäten in den letzten drei Jahren deutlich verbessert haben. Die neuen Berechnungen zeigen auch eine interessante turnaround Progression in diesem Bereich. Die Studie zur Linienverbreiterung unter Verwendung von Propynal als Anwendungsmolekül bestätigte die Annahme, dass für Moleküle mit 6 - 10 Atomen keine Notwendigkeit besteht, beyond Voigt-Profile zu verwenden, wie sie für kleine Moleküle (N2 , H2 O, CH4, NH3 , etc.) benutzt werden. Der Grund dafür ist, dass die höhere Masse und der größere Trägheitstensor zu einer hohen Schwingungszustandsdichte führen, wodurch die genaue Form des Verbreiterungsprofil weniger relevant wird. Am Ende dieser Arbeit werden verschiedene Laufzeitoptimierungen analysiert. Die Parallelisierung zeigt eine nahezu perfekte Skalierung in der Anzahl der CPU-Kerne für die Vorberechnungen der Schwingungsintegrale und für die Intensitätsberechnung. Darüber hinaus sparen die Vorberechnungen der Schwingungsintegrale etwa einen Faktor von 8 an Gesamtrechenzeit ein. Die Kontraktion der MSRB-Koeffizienten mit den RVCI-Koeffizienten führt zu einer Gesamtrechenzeitreduktion von 50% für H2CS und 97% für Ketenimin. Die derzeitige Implementierung der RVCI-Theorie in MOLPRO ist in der Lage, Infrarot- und Raman-Spektren für bis zu 10 Atome, von T = 0 K bis zu Raumtemperatur und über einen weiten Spektralbereich zu berechnen. Die Kombination all dieser Eigenschaften erfordert jedoch große Rechenressourcen. Im Ausblick wird daher eine Liste von Optimierungen zur Steigerung der Recheneffizienz vorgestellt. Darüber hinaus wird eine Reihe von möglichen zusätzlichen Funktionalitäten und Methoden zur Erhöhung der Robustheit des Programms aufgelistet.Item Open Access Chromium in minerals as tracer of the polycyclic evolution of eclogite and related metabasite from the Pohorje Mountains, Slovenian Eastern Alps(2023) Li, Botao; Massonne, Hans‐JoachimSignificantly different peak pressure-temperature (P-T) conditions (18-26 kbar and 630-760°C versus 29-37 kbar and 750-940°C) have previously been published for eclogite and related metabasites from the south‐eastern flank of the Pohorje Mountains in Slovenia. These rocks can show a bimodal distribution of chromium in the rock‐forming minerals, particularly garnet, the role of which in their metamorphic evolution is unclear. Therefore, we studied an eclogite and a related rock with clinopyroxene containing only 17 mol% jadeite + acmite (sample 18Ca35a). KαCr intensity maps of garnet particularly in sample 18Ca35a show a sharp irregular boundary between the core (Gt1) and the mantle (Gt2). Gt1 of millimetre‐sized garnet in this rock is nearly Cr‐free and unzoned, whereas Gt2 is of different composition (0.22 wt.% Cr2O3) and slightly zoned. Nearly Cr‐free amphibole, (clino)zoisite, kyanite and staurolite inclusions are present in Gt1. The matrix consists of garnet and Cr‐bearing clinopyroxene, (clino)zoisite and amphibole. Thermodynamic modelling suggests peak P-T conditions of 22.5 ± 2 kbar at 710 ± 25°C (Gt1) and 23 ± 2 kbar at 700 ± 25°C (Gt2) in both samples. We interpret these findings to suggest that olivine‐ and hornblende‐bearing gabbros with some chromite experienced early metamorphism in the eclogite facies, when Gt1 formed. The rock was subsequently exhumed and cooled leading to significant garnet corrosion. A second stage of metamorphism, recognized by mappable Cr contents in garnet, led to the growth of Gt2 and other Cr‐bearing minerals at the expense of chromite relics, which survived stage I. The peak P-T conditions of stage II are compatible with those previously derived by same authors and support the view that probably no ultrahigh‐pressure eclogite exists in the Pohorje Mountains. We relate the two metamorphic events to the Cretaceous and Palaeogene high‐pressure events recently reported from micaschists of the Pohorje Mountains.Item Open Access Macrocyclization of dienes under confinement with cationic tungsten imido/oxo alkylidene N‐heterocyclic carbene complexes(2023) Ziegler, Felix; Bruckner, Johanna R.; Nowakowski, Michal; Bauer, Matthias; Probst, Patrick; Atwi, Boshra; Buchmeiser, Michael R.Macrocyclization reactions are still challenging due to competing oligomerization, which requires the use of small substrate concentrations. Here, the cationic tungsten imido and tungsten oxo alkylidene N-heterocyclic carbene complexes [[W(N-2,6-Cl2-C6H3)(CHCMe2Ph(OC6F5)(pivalonitrile)(IMes)+ B(ArF)4-] (W1) and [W(O (CHCMe2Ph(OCMe(CF3)2)(IMes)(CH3CN)+ B(ArF)4-] (W2) (IMes=1,3-dimesitylimidazol-2-ylidene; B(ArF)4-=tetrakis(3,5-bis(trifluoromethyl)phenyl borate) have been immobilized inside the pores of ordered mesoporous silica (OMS) with pore diameters of 3.3 and 6.8 nm, respectively, using a pore-selective immobilization protocol. X-ray absorption spectroscopy of W1@OMS showed that even though the catalyst structure is contracted due to confinement by the mesopores, both the oxidation state and structure of the catalyst stayed intact upon immobilization. Catalytic testing with four differently sized α,ω-dienes revealed a dramatically increased macrocyclization (MC) and Z-selectivity of the supported catalysts compared to the homogenous progenitors, allowing high substrate concentrations of 25 mM. With the supported complexes, a maximum increase in MC-selectivity from 27 to 81 % and in Z-selectivity from 17 to 34 % was achieved. In general, smaller mesopores exhibited a stronger confinement effect. A comparison of the two supported tungsten-based catalysts showed that W1@OMS possesses a higher MC-selectivity, while W2@OMS exhibits a higher Z-selectivity which can be rationalized by the structures of the catalysts.Item Open Access Darstellung und Untersuchungen neuer Übergangsmetallkomplexe von Borylphosphanen(2023) Goerigk, Florian; Gudat, Dietrich (Prof. Dr.)