11 Interfakultäre Einrichtungen
Permanent URI for this collectionhttps://elib.uni-stuttgart.de/handle/11682/12
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Item Open Access Modeling the chemoelectromechanical behavior of skeletal muscle using the parallel open-source software library OpenCMISS(2013) Heidlauf, Thomas; Röhrle, OliverAn extensible, flexible, multiscale and multiphysics model for non-isometric skeletal muscle behavior is presented. The skeletal muscle chemoelectromechanical model is based on a bottom-up approach modeling the entire excitation-contraction pathway by strongly coupling a detailed biophysical model of a half-sarcomere to the propagation of action potentials along skeletal muscle fibers, and linking cellular parameters to a transversely isotropic continuum-mechanical constitutive equation describing the overall mechanical behavior of skeletal muscle tissue. Since the multiscale model exhibits separable time scales, a special emphasis is placed on employing computationally efficient staggered solution schemes. Further, the implementation builds on the open-source software library OpenCMISS and uses state-ofthe-art parallelization techniques taking advantage of the unique anatomical fiber architecture of skeletal muscles. OpenCMISS utilizes standardized data structures for geometrical aspects (FieldML) and cellular models (CellML). Both standards are designed to allow for a maximum on flexibility, reproducibility, and extensibility. The results demonstrate the model´s capability of simulating different aspects of non-isometric muscle contraction and to efficiently simulate the chemoelectromechanical behavior in complex skeletal muscles such as the tibialis anterior muscle.Item Open Access Tailoring enhanced optical chirality : design principles for chiral plasmonic nanostructures(2012) Schäferling, Martin; Dregely, Daniel; Hentschel, Mario; Giessen, HaraldElectromagnetic fields with strong optical chirality can be formed in the near-field of chiral plasmonic nanostructures. We calculate and visualize the degree of chirality to identify regions with relatively high values. This leads to design principles for a simple utilization of chiral fields. We investigate planar geometries which offer a convenient way to access the designated fields as well as three-dimensional nanostructures which show a very high local optical chirality.Item Open Access A physiologically based, multi-scale model of skeletal muscle structure and function(2012) Röhrle, Oliver; Davidson, John B.; Pullan, Andrew J.Models of skeletal muscle can be classified as phenomenological or biophysical. Phenomenological models predict the muscle’s response to a specified input based on experimental measurements. Prominent phenomenological models are the Hill-type muscle models, which have been incorporated into rigid-body modeling frameworks, and three-dimensional continuum-mechanical models. Biophysically based models attempt to predict the muscle’s response as emerging from the underlying physiology of the system. In this contribution, the conventional biophysically based modeling methodology is extended to include several structural and functional characteristics of skeletal muscle. The result is a physiologically based, multi-scale skeletal muscle finite element model that is capable of representing detailed, geometrical descriptions of skeletal muscle fibers and their grouping. Together with a well-established model of motor-unit recruitment, the electro-physiological behavior of single muscle fibers within motor units is computed and linked to a continuummechanical constitutive law. The bridging between the cellular level and the organ level has been achieved via a multi-scale constitutive law and homogenization. The effect of homogenization has been investigated by varying the number of embedded skeletal muscle fibers and/or motor units and computing the resulting exerted muscle forces while applying the same excitatory input. All simulations were conducted using an anatomically realistic finite element model of the tibialis anterior muscle. Given the fact that the underlying electro-physiological cellular muscle model is capable of modeling metabolic fatigue effects such as potassium accumulation in the T-tubular space and inorganic phosphate build-up, the proposed framework provides a novel simulation-based way to investigate muscle behavior ranging from motor-unit recruitment to force generation and fatigue.Item Open Access A multiscale chemo-electro-mechanical skeletal muscle model to analyze muscle contraction and force generation for different muscle fiber arrangements(2014) Heidlauf, Thomas; Röhrle, OliverThe presented chemo-electro-mechanical skeletal muscle model relies on a continuum-mechanical formulation describing the muscle's deformation and force generation on the macroscopic muscle level. Unlike other three-dimensional models, the description of the activation-induced behavior of the mechanical model is entirely based on chemo-electro-mechanical principles on the microscopic sarcomere level. Yet, the multiscale model reproduces key characteristics of skeletal muscles such as experimental force-length and force-velocity data on the macroscopic whole muscle level. The paper presents the methodological approaches required to obtain such a multiscale model, and demonstrates the feasibility of using such a model to analyze differences in the mechanical behavior of parallel-fibered muscles, in which the muscle fibers either span the entire length of the fascicles or terminate intrafascicularly. The presented results reveal that muscles, in which the fibers span the entire length of the fascicles, show lower peak forces, more dispersed twitches and fusion of twitches at lower stimulation frequencies. In detail, the model predicted twitch rise times of 38.2 ms and 17.2 ms for a 12 cm long muscle, in which the fibers span the entire length of the fascicles and with twelve fiber compartments in series, respectively. Further, the twelve-compartment model predicted peak twitch forces that were 19 % higher than in the single-compartment model. The analysis of sarcomere lengths during fixed-end single twitch contractions at optimal length predicts rather small sarcomere length changes. The observed lengths range from 75 to 111 % of the optimal sarcomere length, which corresponds to a region with maximum filament overlap. This result suggests that stability issues resulting from activation-induced stretches of non-activated sarcomeres are unlikely in muscles with passive forces appearing at short muscle length.Item Open Access Coordinating with a robot partner affects neural processing related to action monitoring(2021) Czeszumski, Artur; Gert, Anna L.; Keshava, Ashima; Ghadirzadeh, Ali; Kalthoff, Tilman; Ehinger, Benedikt V.; Tiessen, Max; Björkman, Mårten; Kragic, Danica; König, PeterRobots start to play a role in our social landscape, and they are progressively becoming responsive, both physically and socially. It begs the question of how humans react to and interact with robots in a coordinated manner and what the neural underpinnings of such behavior are. This exploratory study aims to understand the differences in human-human and human-robot interactions at a behavioral level and from a neurophysiological perspective. For this purpose, we adapted a collaborative dynamical paradigm from the literature. We asked 12 participants to hold two corners of a tablet while collaboratively guiding a ball around a circular track either with another participant or a robot. In irregular intervals, the ball was perturbed outward creating an artificial error in the behavior, which required corrective measures to return to the circular track again. Concurrently, we recorded electroencephalography (EEG). In the behavioral data, we found an increased velocity and positional error of the ball from the track in the human-human condition vs. human-robot condition. For the EEG data, we computed event-related potentials. We found a significant difference between human and robot partners driven by significant clusters at fronto-central electrodes. The amplitudes were stronger with a robot partner, suggesting a different neural processing. All in all, our exploratory study suggests that coordinating with robots affects action monitoring related processing. In the investigated paradigm, human participants treat errors during human-robot interaction differently from those made during interactions with other humans. These results can improve communication between humans and robot with the use of neural activity in real-time.Item Open Access Efficient wildland fire simulation via nonlinear model order reduction(2021) Black, Felix; Schulze, Philipp; Unger, BenjaminWe propose a new hyper-reduction method for a recently introduced nonlinear model reduction framework based on dynamically transformed basis functions and especially well-suited for transport-dominated systems. Furthermore, we discuss applying this new method to a wildland fire model whose dynamics feature traveling combustion waves and local ignition and is thus challenging for classical model reduction schemes based on linear subspaces. The new hyper-reduction framework allows us to construct parameter-dependent reduced-order models (ROMs) with efficient offline/online decomposition. The numerical experiments demonstrate that the ROMs obtained by the novel method outperform those obtained by a classical approach using the proper orthogonal decomposition and the discrete empirical interpolation method in terms of run time and accuracy.