08 Fakultät Mathematik und Physik
Permanent URI for this collectionhttps://elib.uni-stuttgart.de/handle/11682/9
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Item Open Access Machine learning-driven investigation of the structure and dynamics of the BMIM-BF4 room temperature ionic liquid(2024) Zills, Fabian; Schäfer, Moritz René; Tovey, Samuel; Kästner, Johannes; Holm, ChristianRoom-temperature ionic liquids are an exciting group of materials with the potential to revolutionize energy storage. Due to their chemical structure and means of interaction, they are challenging to study computationally. Classical descriptions of their inter- and intra-molecular interactions require time intensive parametrization of force-fields which is prone to assumptions. While ab initio molecular dynamics approaches can capture all necessary interactions, they are too slow to achieve the time and length scales required. In this work, we take a step towards addressing these challenges by applying state-of-the-art machine-learned potentials to the simulation of 1-butyl-3-methylimidazolium tetrafluoroborate. We demonstrate a learning-on-the-fly procedure to train machine-learned potentials from single-point density functional theory calculations before performing production molecular dynamics simulations. Obtained structural and dynamical properties are in good agreement with computational and experimental references. Furthermore, our results show that hybrid machine-learned potentials can contribute to an improved prediction accuracy by mitigating the inherent shortsightedness of the models. Given that room-temperature ionic liquids necessitate long simulations to address their slow dynamics, achieving an optimal balance between accuracy and computational cost becomes imperative. To facilitate further investigation of these materials, we have made our IPSuite-based training and simulation workflow publicly accessible, enabling easy replication or adaptation to similar systems.Item Open Access The presence of a wall enhances the probability for ring‐closing metathesis : insights from classical polymer theory and atomistic simulations(2020) Tischler, Ingo; Schlaich, Alexander; Holm, ChristianThe probability distribution of chain ends meeting when one end of the polymer is fixed to a certain distance to a reflecting wall is investigated. For an ideal polymer chain the probability distribution can be evaluated analytically via classic polymer theory. These analytical predictions are compared to atomistic MD simulations of one tethered alkane chain close to the wall. The results demonstrate that a confining wall can lead to a significant increase in the return probability for the chain ends, and thus, can increase the occurrence of ring‐closing reactions. It is further demonstrated that the excess return probability shows a maximum at a certain distance, thereby yielding an optimal catalyst position in the ring‐closing reaction.Item Open Access Phase-space resolved decay rates of driven systems near the transition state(2020) Feldmaier, Matthias; Main, Jörg (Prof. Dr.)Die Bewegung einzelner Atome oder Moleküle bei chemischen Reaktionen lässt sich in vielen Fällen durch klassische Mechanik auf einer Born-Oppenheimer Potentialfläche beschreiben. Hierbei sind die Reaktanten oft durch eine Rang-1 Barriere von den Produkten getrennt. Eine solche Barriere ist durch einen instabilen Freiheitsgrad, die Reaktionskoordinate und eine gegebene Anzahl an stabilen Freiheitsgraden, die orthogonalen Moden, charakterisiert. Eine reagierende Trajektorie wird die Barriere meist in der Sattelregion, d. h. in einer direkten Umgebung des Sattels, überqueren. Diese Region fungiert als Flaschenhals für die Reaktion. Im Rahmen der Theorie der Übergangszustände (engl. transition state theory, TST) können Reaktionsraten über den Fluss reaktiver Trajektorien durch eine nur einmal durchstoßene Trennfläche (engl. dividing surface, DS) berechnet werden. Eine solche Trennfläche ist an der normal hyperbolischen invarianten Mannigfaltigkeit (NHIM) des Sattels verankert und trennt das System in Reaktanten und Produkte. Die NHIM ist dabei ein spezieller Unterraum des vollen Phasenraums und enthält Trajektorien, welche für alle Zeiten an die Sattelregion gebunden sind. Da diese Trajektorien somit weder zur Reaktanten- noch zur Produktseite gehören, bildet die NHIM einen Übergangszustand (engl. transition state, TS) der Reaktion. Für getriebene Systeme ist dieser zeitabhängig. In dieser Arbeit werden anhand eines zweidimensionalen, getriebenen Modellsystems mehrere Methoden zur Berechnung von NHIM und DS im Phasenraum vorgestellt. Basierend auf der Dynamik in einer direkten Umgebung der NHIM werden außerdem verschiedene Ansätze zur Berechnung des zugehörigen Zerfalls der Reaktantenpopulation nahe des TS diskutiert. Anschließend werden die vorgestellten Methoden auf ein realistischeres chemisches Modell angewandt, der getriebenen LiCN <-> LiNC Isomerisationsreaktion. Ein wichtiges Resultat hierbei ist, dass das externe Treiben dieses Systems einen großen Einfluss hat, sowohl auf die Dynamik von Trajektorien in der NHIM, als auch auf den zugehörigen Zerfall der Reaktantenpopulation nahe des TS.Item Open Access Monoclinic SrIrO3 : a Dirac semimetal produced by non-symmorphic symmetry and spin-orbit coupling(2018) Takayama, Tomohiro; Yaresko, Alexander N.; Takagi, HidenoriSrIrO3 crystallizes in a monoclinic structure of distorted hexagonal perovskite at ambient pressure. The transport measurements show that the monoclinic SrIrO3 is a low-carrier density semimetal, as in the orthorhombic perovskite polymorph. The electronic structure calculation indicates a semimetallic band structure with Dirac bands at two high-symmetry points of Brillouin zone only when spin-orbit coupling is incorporated, suggesting that the semimetallic state is produced by the strong spin-orbit coupling. We argue that the Dirac bands are protected by the non-symmorphic symmetry of lattice.Item Open Access Energy transfer through conjugated polyenes(1989) Maier, Stefan; Port, Helmut; Wolf, Hans Christoph; Effenberger, Franz; Schlosser, HubertFrom an analysis of absorption, fluorescence and excitation spectra of linear polyene molecules with 4 to 13 double bonds and one or two aromatic substituents at the chain ends we conclude that the aromatic substituents can be excited individually, and that intramolecular energy transfer from one end group via the polyene to the other end group is possible.Item Open Access CO2-induced drastic decharging of dielectric surfaces in aqueous suspensions(2024) Vogel, Peter; Beyer, David; Holm, Christian; Palberg, ThomasWe study the influence of airborne CO2 on the charge state of carboxylate stabilized polymer latex particles suspended in aqueous electrolytes. We combine conductometric experiments interpreted in terms of Hessinger's conductivity model with Poisson-Boltzmann cell (PBC) model calculations with charge regulation boundary conditions. Without CO2, a minority of the weakly acidic surface groups are dissociated and only a fraction of the total number of counter-ions actually contribute to conductivity. The remaining counter-ions exchange freely with added other ions like Na+, K+ or Cs+. From the PBC-calculations we infer a corresponding pKa of 4.26 as well as a renormalized charge in reasonably good agreement with the number of freely mobile counter-ions. Equilibration of salt- and CO2-free suspensions against ambient air leads to a drastic de-charging, which exceeds by far the expected effects of to dissolved CO2 and its dissociation products. Further, no counter-ion-exchange is observed. To reproduce the experimental findings, we have to assume an effective pKa of 6.48. This direct influence of CO2 on the state of surface group dissociation explains our recent finding of a CO2-induced decrease of the ζ-potential and supports the suggestion of an additional charge regulation caused by molecular CO2. Given the importance of charged surfaces in contact with aqueous electrolytes, we anticipate that our observations bear substantial theoretical challenges and important implications for applications ranging from desalination to bio-membranes.Item Open Access Heteroepitaxial tuning of resonant forbidden reflections in a spinel(2024) Oka, Ryosuke; Kim, Minu; Wochner, Peter; Francoual, Sonia; Palstra, Thomas T. M.; Takagi, Hidenori; Huang, DennisIn resonant elastic X-ray scattering (REXS), low site symmetries in a crystal may be revealed through resonant Bragg reflections that are normally forbidden in conventional X-ray diffraction due to screw axes and/or glide planes. These resonant forbidden reflections have been observed in spinel compounds, but to better understand and utilize their connection to microscopic material parameters and possible charge and/or orbital ordering, a systematic study of their dependence on growth conditions and applied strain is desired. We performed REXS at the V K edge and examined the resonant forbidden (002) reflection in thin films of the spinel LiV2O4 grown on three substrates: MgAl2O4, SrTiO3, and MgO. The energy dependence of the (002) reflection shows a systematic evolution as epitaxial strain modifies the local anisotropy of the V site. More strikingly, the integrated intensity of the (002) reflection varies by more than an order of magnitude in films on different substrates. We speculate that the large variation in integrated intensity reflects the varying degree of antiphase domains that arise during the epitaxy.Item Open Access Confined Ru‐catalysts in a two‐phase heptane/ionic liquid solution : modeling aspects(2020) Kobayashi, Takeshi; Kraus, Hamzeh; Hansen, Niels; Fyta, MariaA modeling approach for atomic‐resolution studies of sup‐ ported ionic liquid phase (SILP) catalytic systems in silica mesoporous confinement with surface hydroxyl and functional groups is proposed. First, a force field for the Ru‐based catalyst is developed. Second, its solvation behavior within a bulk two‐phase system of heptane and an IL is studied. Third, static and dynamic properties of the confined system are investigated. Using classical molecular dynamics simulations, experimentally inaccessible properties can thus be studied that are important for an optimization of a SILP system for performing a ring‐closing metathesis reaction.Item Open Access ddX : polarizable continuum solvation from small molecules to proteins(2024) Nottoli, Michele; Herbst, Michael F.; Mikhalev, Aleksandr; Jha, Abhinav; Lipparini, Filippo; Stamm, BenjaminPolarizable continuum solvation models are popular in both, quantum chemistry and in biophysics, though typically with different requirements for the numerical methods. However, the recent trend of multiscale modeling can be expected to blur field‐specific differences. In this regard, numerical methods based on domain decomposition (dd) have been demonstrated to be sufficiently flexible to be applied all across these levels of theory while remaining systematically accurate and efficient. In this contribution, we present ddX , an open‐source implementation of dd‐methods for various solvation models, which features a uniform interface with classical as well as quantum descriptions of the solute, or any hybrid versions thereof. We explain the key concepts of the library design and its application program interface, and demonstrate the use of ddX for integrating into standard chemistry packages. Numerical tests illustrate the performance of ddX and its interfaces. This article is categorized under: Software > Quantum Chemistry Software > Simulation MethodsItem Open Access Synthesis and optical properties of terminally substituted conjugated polyenes(1988) Effenberger, Franz; Schlosser, Hubert; Bäuerle, Peter; Maier, Stefan; Port, Helmut; Wolf, Hans ChristophLong-chain, conjugated polyenes can function as molecular wires. This is shown by the photophysical properties of polyenes containing naphthyl, anthryl, and tetraphenylporphyrinyl (TPP) terminal groups. When the anthryl group in 1, which is obtainable by a sequence of Wittig reactions, is selectively excited, strong TPP emission is observed.